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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6194322_6194900_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6194322 - 6194900

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

GTCTCATTATTT

Flanking Amino Acid:

ARKLQEEELLANQADQKAAQ

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.8

35.2

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

29.8

-2.3

2.6

30.5

37.5

Minor BPS

55.5

0.25

1.9

73.8

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039315

6172380 - 6199768

27389

ENSAPLT00000037868

6164767 - 6199768

35002

ENSAPLT00000029415

6164767 - 6199768

35002

ENSAPLT00000014842

6164767 - 6201505

36739