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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6195580_6196498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6195580 - 6196498

Intron Length:

919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTCAA

5'SS Class:

major

3'SS Sequence:

TTCTTCTTGTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGCTTTTTATTC

Flanking Amino Acid:

EKKRHDQDWRHDASESPRSR

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

66.8

40.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.3

0.75

0.9

84.4

30.6

Minor 5ss

39.2

-1.2

2.8

40.9

45.4

Minor BPS

54.6

0.12

1.5

61.73

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029415

6164767 - 6199768

35002

ENSAPLT00000014842

6164767 - 6201505

36739

ENSAPLT00000039315

6172380 - 6199768

27389

ENSAPLT00000037868

6164767 - 6199768

35002