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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6196579_6197659_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6196579 - 6197659

Intron Length:

1081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

TQRHKGDKSVRSQPLLDDFE

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

37.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

82.8

0.74

80.6

Minor 5ss

37.8

-1.4

47.1

48.3

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039315

6172380 - 6199768

27389

ENSAPLT00000037868

6164767 - 6199768

35002

ENSAPLT00000029415

6164767 - 6199768

35002

ENSAPLT00000014842

6164767 - 6201505

36739