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Intron Name: Anas_platyrhynchos_platyrhynchos_9_620690_623630_R

Intron Information:

Intron Rank:

135262

Intron Class:

major

Intron Phase:

Intron Coordinates:

620690 - 623630

Intron Length:

2941

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCAC

5'SS Class:

major

3'SS Sequence:

TCTTCTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GGCCCTCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

57.5

41.7

Major BPS

82.2

0.8

0.9

81.6

Major PPT

84.4

0.77

0.7

77.4

31.4

Minor 5ss

29.3

-2.4

3.5

45.6

Minor BPS

49.5

0.04

1.7

63.64

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046244

618094 - 623826

5733