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Intron Name: Anas_platyrhynchos_platyrhynchos_9_620690_627176_R

Intron Information:

Intron Rank:

135260

Intron Class:

major

Intron Phase:

Intron Coordinates:

620690 - 627176

Intron Length:

6487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GGCCCTCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

82.2

0.8

0.9

81.6

Major PPT

84.4

0.77

0.7

77.4

31.4

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

49.5

0.04

1.7

63.64

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029082

620396 - 627918

7523