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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6227990_6295580_F

Intron Information:

Intron Rank:

136765

Intron Class:

major

Intron Phase:

Intron Coordinates:

6227990 - 6295580

Intron Length:

67591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAGAA

U12 Branch Point Sequence:

TTCTCTTTGTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.8

35.2

Major BPS

52.4

0.06

1.1

48.9

36.6

Major PPT

85.3

0.79

0.8

83.6

31.4

Minor 5ss

29.8

-2.3

2.6

30.2

36.8

Minor BPS

46.6

-0.1

3.4

78.04

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046810

6227381 - 6295868

68488