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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6254138_6260502_F

Intron Information:

Intron Rank:

147839

Intron Class:

major

Intron Phase:

Intron Coordinates:

6254138 - 6260502

Intron Length:

6365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGAACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCCTTTTGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

79.3

0.66

0.9

75.6

38.4

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

0.52

1.4

75.64

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033916

6252972 - 6260665

7694