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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6276835_6277943_R

Intron Information:

Intron Rank:

136291

Intron Class:

major

Intron Phase:

Intron Coordinates:

6276835 - 6277943

Intron Length:

1109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTGTTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.5

0.66

74.8

38.9

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

54.2

-0

1.5

53.3

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022809

6276428 - 6278308

1881