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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6332714_6348553_F

Intron Information:

Intron Rank:

137659

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6332714 - 6348553

Intron Length:

15840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

AACGTTGCAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTTTGTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.5

41.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

57.9

0.18

1.1

Minor 5ss

32.5

-2

38.1

40.9

Minor BPS

66.9

0.53

1.8

80.33

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031022

6303446 - 6348713

45268

ENSAPLT00000042102

6325619 - 6348713

23095

ENSAPLT00000040825

6332148 - 6348713

16566