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Intron Name: Anas_platyrhynchos_platyrhynchos_9_636426_637569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

636426 - 637569

Intron Length:

1144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGTAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTGCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCC

U12 Branch Point Sequence:

CCCTCTGCAATA

Flanking Amino Acid:

NLKIHKRTHTGEKPFKCEFE

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

72.1

35.8

Major BPS

35.6

-0.9

4.2

77.4

37.4

Major PPT

0.27

0.9

57.5

Minor 5ss

-1.7

3.4

46.3

Minor BPS

43.6

-0.4

2.1

50.09

42.5

Associated Gene:

Gene:

ZIC1

Ensembl Gene ID:

ENSAPLG00000002960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002991

635211 - 638693

3483