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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6416160_6421938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6416160 - 6421938

Intron Length:

5779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGAAAA

5'SS Class:

major

3'SS Sequence:

TTTCCTTCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTAAC

U12 Branch Point Sequence:

TCTGCCTAACCT

Flanking Amino Acid:

DGTKDENSDYTLFNLIPVGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

34.5

Major BPS

54.3

0.11

1.2

57.5

37.5

Major PPT

84.8

0.78

0.7

80.7

24.4

Minor 5ss

-1.7

46.1

42.9

Minor BPS

53.1

0.17

2.1

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039646

6348734 - 6441268

92535

ENSAPLT00000015108

6348734 - 6476390

127657