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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6480332_6526357_R

Intron Information:

Intron Rank:

151790

Intron Class:

major

Intron Phase:

Intron Coordinates:

6480332 - 6526357

Intron Length:

46026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTACTTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

GATTCCTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

73.8

0.54

0.9

68.6

36.2

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

70.2

0.71

1.6

82.01

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046074

6479077 - 6526783

47707