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Intron Name: Anas_platyrhynchos_platyrhynchos_9_655774_660363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

655774 - 660363

Intron Length:

4590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTGTG

5'SS Class:

major

3'SS Sequence:

TTGCTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCACCTTTAATT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

41.9

Major BPS

100

1.24

0.5

100

Major PPT

81.4

0.71

0.9

75.8

38.2

Minor 5ss

35.4

-1.7

3.5

45.6

44.9

Minor BPS

0.74

1.2

77.99

38.7

Associated Gene:

Gene:

ZIC4

Ensembl Gene ID:

ENSAPLG00000003027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003064

645132 - 660486

15355