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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6696979_6699559_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6696979 - 6699559

Intron Length:

2581

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATA|GCAATGCAA

5'SS Class:

weak_major

3'SS Sequence:

CTTCCTCTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

CATCACTGAACG

Flanking Amino Acid:

CGKSQGHLANRTCVVEGDPH

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.3

47.6

40.9

Major BPS

0.3

34.1

Major PPT

0.61

0.9

76.7

31.9

Minor 5ss

21.7

-3.3

3.9

37.8

Minor BPS

49.9

-0.1

1.8

56.54

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014880

6693978 - 6721505

27528