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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6700164_6707641_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6700164 - 6707641

Intron Length:

7478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTCCAAC

5'SS Class:

weak_major

3'SS Sequence:

TTTGCCAAGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAA

U12 Branch Point Sequence:

TTTGCCAAGACA

Flanking Amino Acid:

DSTSLGNSWQNIDGDGDEFL

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.35

1.2

39.7

Major BPS

0.1

1.1

61.6

34.2

Major PPT

63.6

0.31

1.1

59.1

Minor 5ss

45.9

-0.4

2.6

59.7

45.1

Minor BPS

49.9

-0

2.1

71.33

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014880

6693978 - 6721505

27528