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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6710805_6712034_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6710805 - 6712034

Intron Length:

1230

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCGATCACT

5'SS Class:

weak_major

3'SS Sequence:

AACTCAAATGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

TGTCCTTGAAAC

Flanking Amino Acid:

TDFGVVVKYDAISVLSCSCL

Intron Amino Acid Position:

870

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.3

64.3

41.5

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

49.7

-0

1.1

47.6

37.9

Minor 5ss

26.5

-2.7

3.8

40.8

Minor BPS

56.9

0.2

1.5

67.31

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014880

6693978 - 6721505

27528