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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6717547_6718845_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6717547 - 6718845

Intron Length:

1299

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAAGCAGA

5'SS Class:

major

3'SS Sequence:

CAGTGAAAATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCCAA

U12 Branch Point Sequence:

AGATACAGGACT

Flanking Amino Acid:

RYLIFYSIPMLTQENSTSEC

Intron Amino Acid Position:

1262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.1

68.4

42.1

Major BPS

55.8

0.14

1.3

68.1

Major PPT

49.9

-0

1.1

46.1

43.8

Minor 5ss

28.6

-2.5

3.8

36.7

42.5

Minor BPS

44.8

-0.3

1.9

62.45

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014880

6693978 - 6721505

27528