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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6727790_6728166_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6727790 - 6728166

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAC

U12 Branch Point Sequence:

TTTTGCTTCCCC

Flanking Amino Acid:

LRYGEGVSEQAKRAIGAIGL

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

65.7

0.39

1.1

67.9

37.7

Major PPT

77.9

0.63

0.7

71.5

26.4

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

42.1

-0.6

3.8

73.88

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015017

6726747 - 6729268

2522