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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6733443_6734896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6733443 - 6734896

Intron Length:

1454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

CTTGTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAC

U12 Branch Point Sequence:

CGGCCACCAACG

Flanking Amino Acid:

KPFRKPIYTNYVFSVLLALQ

Intron Amino Acid Position:

1023

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

67.4

39.4

Major BPS

47.8

-0.1

53.1

30.9

Major PPT

80.5

0.69

0.8

72.9

37.4

Minor 5ss

32.6

-2

2.8

43.2

43.8

Minor BPS

-0.9

40.27

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003363

6731646 - 6761613

29968