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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6735529_6735751_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6735529 - 6735751

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAGCGCTG

5'SS Class:

weak_major

3'SS Sequence:

AAGATGGTTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

TTTTCGTGAACC

Flanking Amino Acid:

FLLVKQQPWYVWKLAHFACL

Intron Amino Acid Position:

964

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.07

1.3

48.2

47.6

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

59.9

0.22

1.1

50.7

47.1

Minor 5ss

40.9

-1

3.7

59.5

45.5

Minor BPS

65.8

0.48

2.2

83.45

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003363

6731646 - 6761613

29968