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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6740872_6741019_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6740872 - 6741019

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATCCC

5'SS Class:

strong_major

3'SS Sequence:

GTATCGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACACAA

U12 Branch Point Sequence:

TCTCTGGTATCG

Flanking Amino Acid:

AARIRSVMVTGDNLQTAVTV

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

68.2

36.9

Major BPS

47.2

-0.1

1.1

52.9

34.1

Major PPT

66.3

0.37

1.1

61.6

44.3

Minor 5ss

29.4

-2.4

2.8

36.3

40.6

Minor BPS

37.6

-1

2.6

47.48

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003363

6731646 - 6761613

29968