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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6743312_6745651_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6743312 - 6745651

Intron Length:

2340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCACAACA

5'SS Class:

weak_major

3'SS Sequence:

GCTCCTGTGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

CTTTTCTGACCT

Flanking Amino Acid:

HVCRGNPFSPGIAILHQFPF

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.4

41.1

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

53.8

0.09

1.2

55.3

39.2

Minor 5ss

34.9

-1.7

2.8

39.3

39.8

Minor BPS

60.7

0.41

1.8

80.07

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003363

6731646 - 6761613

29968