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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6756344_6756547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6756344 - 6756547

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGATCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TGCTGTTTGATC

Flanking Amino Acid:

NRAVKKPQLKVRCIQVQKIR

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

83.6

0.76

0.8

77.5

36.5

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

51.3

0.02

1.8

61.42

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003363

6731646 - 6761613

29968