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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6770889_6771361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6770889 - 6771361

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAAAA

U12 Branch Point Sequence:

CTTTCTTTTACA

Flanking Amino Acid:

VTLAVSFLVEEAVIENRALW

Intron Amino Acid Position:

1097

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

55.5

0.14

61.5

32.5

Major PPT

91.9

0.94

0.6

87.1

23.5

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

70.8

0.65

1.6

78.96

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003633

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003802

6770667 - 6812744

42078