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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6780016_6781021_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

6780016 - 6781021

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCAGGTGAT

5'SS Class:

major

3'SS Sequence:

AGGAAGATGACAG|T

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTTACA

Flanking Amino Acid:

TEEYGSLVSVNQTERRIRLA

Intron Amino Acid Position:

738

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

76.8

35.5

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

47.9

-0.1

1.2

35.8

43.9

Minor 5ss

24.3

-3

4.3

39.2

Minor BPS

71.2

0.66

1.5

82.45

31.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003633

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003802

6770667 - 6812744

42078