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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6804855_6812681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6804855 - 6812681

Intron Length:

7827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAC

U12 Branch Point Sequence:

ATAGCAATATTT

Flanking Amino Acid:

QLNQGEENEMEIFGYKTQGC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

70.5

41.3

Major BPS

57.5

0.19

1.1

55.1

40.5

Major PPT

77.2

0.61

69.1

41.8

Minor 5ss

30.6

-2.2

2.9

38.2

41.8

Minor BPS

42.8

-0.4

61.51

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003633

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003802

6770667 - 6812744

42078