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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6819419_6819745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6819419 - 6819745

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CTTTTTGTATTA

Flanking Amino Acid:

AVGGGYTAKKTYDQWKDMMP

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

79.8

33.2

Major BPS

73.8

0.59

1.3

72.8

Major PPT

77.1

0.61

0.9

35.1

Minor 5ss

46.5

-0.4

2.5

63.1

41.4

Minor BPS

46.3

-0.2

2.1

61.49

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004090

6815639 - 6866350

50712

ENSAPLT00000039713

6815639 - 6866350

50712

ENSAPLT00000028440

6815639 - 6866350

50712