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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6819843_6820989_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6819843 - 6820989

Intron Length:

1147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATCACAA

5'SS Class:

weak_major

3'SS Sequence:

ACTGTTTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TGCTCACTAGCT

Flanking Amino Acid:

IWELDEHIDFEKIIKALPDA

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.2

0.22

1.2

51.8

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

73.1

0.52

0.9

65.6

40.4

Minor 5ss

43.4

-0.7

56.6

47.6

Minor BPS

47.6

-0.1

2.1

71.08

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039713

6815639 - 6866350

50712

ENSAPLT00000028440

6815639 - 6866350

50712

ENSAPLT00000004090

6815639 - 6866350

50712