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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6823101_6828644_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6823101 - 6828644

Intron Length:

5544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTACT

5'SS Class:

strong_major

3'SS Sequence:

AAACTCATGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTATAAACT

Flanking Amino Acid:

GYDNDKQYKKSLLGELILLQ

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

1.1

84.4

33.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

57.9

0.18

1.1

41.5

Minor 5ss

43.9

-0.7

2.6

61.4

42.9

Minor BPS

59.8

0.39

1.9

81.66

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028440

6815639 - 6866350

50712

ENSAPLT00000039713

6815639 - 6866350

50712