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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6828756_6833604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6828756 - 6833604

Intron Length:

4849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATGGCT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

GTAGCCATGATT

Flanking Amino Acid:

NTGSYQQKRKVSDKEKIDQL

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

68.4

36.2

Major BPS

68.7

0.47

0.9

67.9

Major PPT

92.1

0.95

0.5

89.1

19.9

Minor 5ss

26.5

-2.7

3.5

46.3

Minor BPS

51.7

0.13

1.7

69.58

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028440

6815639 - 6866350

50712

ENSAPLT00000039713

6815639 - 6866350

50712