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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6844731_6846071_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6844731 - 6846071

Intron Length:

1341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTATCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCATTCTTATCC

Flanking Amino Acid:

MYWIGRTKEQNIRNETKNEL

Intron Amino Acid Position:

903

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

74.3

0.55

0.8

38.5

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

64.6

0.44

1.6

70.52

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039713

6815639 - 6866350

50712

ENSAPLT00000028440

6815639 - 6866350

50712

ENSAPLT00000004090

6815639 - 6866350

50712