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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6849359_6865658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6849359 - 6865658

Intron Length:

16300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TTTATTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATTT

Flanking Amino Acid:

GKRVQLAEDLKKVREIQEKL

Intron Amino Acid Position:

1057

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

72.9

36.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.5

0.91

0.7

89.1

27.7

Minor 5ss

39.2

-1.2

2.7

37.4

Minor BPS

64.2

0.52

1.5

78.46

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039713

6815639 - 6866350

50712

ENSAPLT00000028440

6815639 - 6866350

50712

ENSAPLT00000004090

6815639 - 6866350

50712