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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6877020_6880866_F

Intron Information:

Intron Rank:

131107

Intron Class:

major

Intron Phase:

Intron Coordinates:

6877020 - 6880866

Intron Length:

3847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCGATATTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TTTGTTACAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

76.6

33.6

Major BPS

69.5

0.48

73.5

28.6

Major PPT

71.8

0.49

0.9

65.4

40.1

Minor 5ss

31.7

-2.1

3.1

36.4

Minor BPS

46.1

-0.2

1.9

69.8

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031639

6874693 - 6880932

6240