Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_6955442_6955611_F

Intron Information:

Intron Rank:

149561

Intron Class:

major

Intron Phase:

Intron Coordinates:

6955442 - 6955611

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGCATTT

5'SS Class:

major

3'SS Sequence:

TGACATTTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GTATTTTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.2

68.5

39.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

75.7

0.58

68.5

41.6

Minor 5ss

42.6

-0.8

3.4

64.3

47.2

Minor BPS

74.1

0.73

1.1

75.49

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021589

6954697 - 6956063

1367