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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6998199_6998282_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6998199 - 6998282

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTCTTTTT

5'SS Class:

weak_major

3'SS Sequence:

TCTCTGAAGAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

GCTCTCTGAAGA

Flanking Amino Acid:

FVTSLLSKSGAVVASLIIIS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.2

0.17

1.3

63.9

42.8

Major BPS

69.8

0.49

37.5

Major PPT

46.2

-0.2

1.7

50.3

Minor 5ss

41.1

-1

51.2

45.3

Minor BPS

48.6

-0.1

1.8

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017443

6997548 - 6998506

959