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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7032222_7033725_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7032222 - 7033725

Intron Length:

1504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGAGAC

5'SS Class:

major

3'SS Sequence:

TTCACTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CTAACTTTAAAA

Flanking Amino Acid:

YRLTIPQPPQEAVDRCGVCF

Intron Amino Acid Position:

1188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.2

61.6

37.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

82.3

0.73

0.8

76.9

31.6

Minor 5ss

25.7

-2.8

3.3

32.5

42.5

Minor BPS

61.2

0.35

1.5

66.23

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037787

7031024 - 7082991

51968

ENSAPLT00000031918

7031024 - 7083534

52511

ENSAPLT00000004608

7027158 - 7083534

56377

ENSAPLT00000044472

7031024 - 7082991

51968