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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7039983_7040810_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7039983 - 7040810

Intron Length:

828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCATTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTTTCTTTCATT

Flanking Amino Acid:

LAIILVVVFTMSLNPAWKEL

Intron Amino Acid Position:

980

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

84.6

0.86

41.2

Major PPT

89.1

0.88

0.7

83.7

30.9

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

73.9

0.83

1.6

91.31

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031918

7031024 - 7083534

52511

ENSAPLT00000017208

7031024 - 7082991

51968

ENSAPLT00000004608

7027158 - 7083534

56377

ENSAPLT00000044472

7031024 - 7082991

51968

ENSAPLT00000037787

7031024 - 7082991

51968