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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7043844_7043924_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7043844 - 7043924

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGAAAT

U12 Branch Point Sequence:

TAAGCACTAAGA

Flanking Amino Acid:

LEHFQDLVPKLVLRGTVFAR

Intron Amino Acid Position:

846

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

50.6

0.02

1.1

36.4

Major PPT

89.2

0.88

0.7

81.2

36.5

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

43.2

-0.5

2.2

55.58

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037787

7031024 - 7082991

51968

ENSAPLT00000031918

7031024 - 7083534

52511

ENSAPLT00000017208

7031024 - 7082991

51968

ENSAPLT00000004608

7027158 - 7083534

56377

ENSAPLT00000044472

7031024 - 7082991

51968