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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7104005_7104610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7104005 - 7104610

Intron Length:

606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTGATAACA

Flanking Amino Acid:

ARYVLKDYVNGKLLYCHPPP

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.5

28.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.63

0.9

37.4

Minor 5ss

45.3

-0.5

2.8

64.3

39.9

Minor BPS

57.6

0.24

2.3

79.79

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004856

7102293 - 7113851

11559