Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_7113696_7113776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7113696 - 7113776

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGGCGG

5'SS Class:

major

3'SS Sequence:

CCCGTCCCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTAAC

U12 Branch Point Sequence:

TGCGGGCTAACG

Flanking Amino Acid:

GAGRRGAASWRHASEVGDEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

46.1

49.1

Major BPS

51.7

0.04

1.3

55.3

40.3

Major PPT

62.6

0.28

57.4

33.4

Minor 5ss

28.3

-2.5

3.4

29.2

43.4

Minor BPS

37.2

-1.1

2.5

44.1

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004856

7102293 - 7113851

11559