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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7160061_7170206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7160061 - 7170206

Intron Length:

10146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCCG

5'SS Class:

major

3'SS Sequence:

CCATTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGTTGCAGAGCA

Flanking Amino Acid:

GIAREMQPVYRSAKMSPRVL

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

59.6

44.8

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

83.8

0.76

0.8

76.1

37.6

Minor 5ss

37.2

-1.5

3.2

47.9

47.8

Minor BPS

43.8

-0.4

2.2

62.45

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032546

7159188 - 7196708

37521