Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_7210353_7211732_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7210353 - 7211732

Intron Length:

1380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTAATA

5'SS Class:

major

3'SS Sequence:

TTGTATATGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TAACTCCTAACA

Flanking Amino Acid:

GVKKPQPGSQRQEKEAYIKA

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

73.6

Major BPS

76.8

0.67

0.9

75.9

Major PPT

70.2

0.45

1.1

65.9

Minor 5ss

35.7

-1.6

3.3

48.9

46.9

Minor BPS

57.5

0.23

1.7

67.91

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037838

7200538 - 7247817

47280

ENSAPLT00000005054

7200538 - 7247817

47280