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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7236140_7237128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7236140 - 7237128

Intron Length:

989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AGCTTTTTAAAT

Flanking Amino Acid:

SKRRSEILKSMLSFMYAHLA

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

72.5

33.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

91.7

0.94

0.6

84.6

30.3

Minor 5ss

38.7

-1.3

3.1

51.6

45.1

Minor BPS

62.3

0.46

1.4

71.69

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037838

7200538 - 7247817

47280

ENSAPLT00000005054

7200538 - 7247817

47280