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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7281549_7287504_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7281549 - 7287504

Intron Length:

5956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAG

U12 Branch Point Sequence:

CCCACCTCAGCC

Flanking Amino Acid:

CRASIWGSYQVSHLHPGTAM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

49.8

-0

1.5

59.3

39.1

Major PPT

83.7

0.76

0.7

76.5

32.1

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

46.1

-0.3

1.9

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005538

7278577 - 7288702

10126