Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_7290886_7292834_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7290886 - 7292834

Intron Length:

1949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTGAG

5'SS Class:

major

3'SS Sequence:

TCTTCCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

TCTTCCTCCACA

Flanking Amino Acid:

NNRYNPMETCWLLVCAAGGN

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

61.1

39.6

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

81.6

0.71

0.7

76.2

Minor 5ss

25.3

-2.8

3.2

26.8

38.4

Minor BPS

61.5

0.36

75.44

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005372

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005557

7290697 - 7311563

20867