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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7311505_7312328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7311505 - 7312328

Intron Length:

824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AATTGAGCAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

67.8

43.5

Major BPS

71.2

0.53

70.3

31.9

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

31.1

-2.2

3.3

41.9

44.9

Minor BPS

40.9

-0.6

2.5

65.27

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005592

7311444 - 7324355

12912