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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7488338_7493491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7488338 - 7493491

Intron Length:

5154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGACAT

U12 Branch Point Sequence:

TTTGTTTTGCCC

Flanking Amino Acid:

FNSKTRGDKGQSFNDKRKKN

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.2

30.7

Major BPS

59.8

0.24

1.2

39.8

Major PPT

89.7

0.89

0.6

88.5

21.1

Minor 5ss

37.9

-1.4

2.9

40.8

45.4

Minor BPS

43.1

-0.5

3.4

68.18

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005775

7361439 - 7494306

132868

ENSAPLT00000025530

7360996 - 7509059

148064

ENSAPLT00000018613

7360996 - 7509738

148743