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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7488338_7494295_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7488338 - 7494295

Intron Length:

5958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GACTACTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTCTTTTTATT

Flanking Amino Acid:

FNSKTRGDKGEVPDDMGSKG

Intron Amino Acid Position:

885

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.2

30.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.2

0.45

0.9

62.2

39.2

Minor 5ss

37.9

-1.4

2.9

40.8

45.4

Minor BPS

55.6

0.26

1.6

73.31

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018942

7360996 - 7509738

148743