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Intron Name: Anas_platyrhynchos_platyrhynchos_9_7502156_7505610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7502156 - 7505610

Intron Length:

3455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTACTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TCTTTCTTACTT

Flanking Amino Acid:

VQSVREVAEKGKHCILDVSG

Intron Amino Acid Position:

1041

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

71.2

40.6

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

83.1

0.74

0.7

81.3

30.3

Minor 5ss

32.9

-1.9

40.4

45.7

Minor BPS

69.1

0.68

1.6

82.74

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018942

7360996 - 7509738

148743

ENSAPLT00000018613

7360996 - 7509738

148743

ENSAPLT00000025530

7360996 - 7509059

148064