Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_7526675_7526779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7526675 - 7526779

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATTTAGT

5'SS Class:

major

3'SS Sequence:

TTTCTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCGAT

U12 Branch Point Sequence:

GTGACAGTGACT

Flanking Amino Acid:

KHSTVFENTDGKNTESWARN

Intron Amino Acid Position:

610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

41.2

Major BPS

64.9

0.37

1.3

64.2

Major PPT

93.7

0.98

0.6

92.5

17.4

Minor 5ss

43.8

-0.7

2.6

57.5

41.8

Minor BPS

45.3

-0.2

2.3

65.96

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006376

7514785 - 7528554

13770